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Guide

How to clean clear aligners in the US

A simple daily routine keeps clear aligners clean: brush your teeth before they go back, rinse them each time, and clean them gently once a day. Here are the methods compared, what to do away from home, and how to deal with smell, stains, cloudiness and damage.

Overhead view of hands brushing a clear aligner over a basin.

Take aligners out for meals and for anything you drink except plain water. Brush your teeth before they go back in. Once a day, clean the aligners gently with a soft toothbrush and lukewarm or cool water, or with the method your orthodontist or aligner company gave you. Keep hot water, abrasive toothpaste and harsh chemicals off the plastic.

A daily routine

  1. Out and into the case. Each time you eat or drink something other than water, put the aligners straight into their case, not a napkin, pocket or purse, where they are easily lost.
  2. Brush your teeth before the aligners go back in, because liquid and food trapped under a tray sit against the teeth.
  3. Rinse the aligners. A rinse under cool running water removes saliva and loose debris before they go back.
  4. Clean them properly once a day. Brush the aligners gently, inside and out, with a soft toothbrush kept only for them, using lukewarm or cool water and, if you like, a little mild soap.
  5. Soak, if you want to. A cleaning tablet or crystals made for aligners or retainers is an extra, not a replacement for brushing. Follow the timing on the pack.
  6. Rinse and put them back. Rinse off any soap or soak thoroughly, then put the aligners back on clean teeth.

Never use hot water, which can warp the plastic. If your aligners came with their own instructions, follow those.

Methods compared

MethodHowWhenNotes
Soft brush and lukewarm waterBrush gently, rinseDailyInvisalign's usual instruction
Soft brush, cool water and mild soapBrush gently, rinse wellDailyAmerican Association of Orthodontists (AAO) advice for clear plastic retainers. Aligners are similar plastic, but follow the instructions for your own aligners first
Cleaning tablets or crystalsDissolve in water to cover the tray, soak, rinseAs the pack directs; the AAO suggests a soak at least weekly for retainersExtra clean for film and smell; Invisalign sells its own crystals and foam
Ultrasonic deviceSound waves shake debris loose in water or a cleaning solutionOptionalNot needed for a good clean; use only if your orthodontist agrees
UV deviceUltraviolet light, used after cleaning; it does not remove film or debrisOptionalNot a substitute for brushing; use only if your orthodontist agrees
Toothpaste on alignersNot the usual methodOnly if your instructions allow itOne Invisalign page allows a small amount; abrasive and whitening pastes are made to scrub enamel, not clear plastic
Hot water, dishwasher, bleach, alcohol-based productsAvoidNeverThe AAO warns against each; heat warps plastic
Vinegar or baking soda soaksAvoid unless told otherwiseNot in the published instructionsUse a product made for the job instead

Tablets, crystals and devices are compared in aligner and retainer cleaning products.

Away from home

Carry the case, a travel toothbrush and a bottle of water.

If you cannot brush after eating, rinse your mouth and the aligners thoroughly with water, put them back, and brush properly at the next chance. That is a stopgap, not the routine.

After acidic food or drink, ask your orthodontist how long to wait before brushing. A hot car can warp aligners just as hot water can, so do not leave the case on a dashboard or in a parked car.

When something is not right

ProblemLikely causeWhat to do
Aligners smell or taste unpleasantFood or plaque left on teeth or aligners; daily clean skippedBrush your teeth before the aligners go back in; clean them daily; add a soak. If a bad taste or sore gums persist, see your dentist
Stains or yellowingDrinks other than water with the aligners inTake them out for every drink except water; clean daily. See eating and drinking with clear aligners
Cloudy or white filmBuild-up of film, or fine scratches from scrubbing or abrasive pasteGentle daily cleaning and a soak can lift film. Scratches will not clear; ask your orthodontist if a cloudy tray is a concern
Warped, cracked or no longer fitsHeat, biting on the tray, or being droppedStop using an aligner that cuts or does not fit fully, and contact your orthodontist right away

The case

Keep aligners in their case whenever they are out of your mouth, and keep the case clean. Rinse it and let it air-dry regularly, and keep it away from pets, which the AAO specifically warns about.

Retainers

A retainer is cleaned in much the same way, and it lasts far longer than any one aligner, so care matters more. Rinse it with cool water, brush it gently with a soft toothbrush and mild soap, and let it air-dry; keep it away from hot water, bleach and the dishwasher. A retainer is typically needed for life, though the hours a day usually fall over time. If a retainer no longer fits or is cracked, contact the clinician responsible; do not force it on. What changes after the last aligner is in care after aligner treatment.

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Sources

  1. Align Technology (Invisalign). Week 1 versus week 2, page date April 2026Accessed October 22, 2026
  2. Align Technology (Invisalign). Cases for InvisalignAccessed October 22, 2026
  3. Align Technology (Invisalign). Invisalign treatment while pregnant, page date April 2025Accessed October 22, 2026
  4. American Association of Orthodontists. RetainersAccessed October 22, 2026
  5. American Association of Orthodontists. Will my teeth stay where my orthodontist moved them?, October 14, 2025Accessed October 22, 2026
  6. American Association of Orthodontists. Clear aligner therapyAccessed October 22, 2026
  7. American Association of Orthodontists. Aligners FAQsAccessed October 22, 2026
  8. American Association of Orthodontists. Retainer care 101Accessed October 22, 2026